The results show that, using only 6 epochs for training, the CNNs achieved very high performance on the classification task. Deep cnns for microscopic image classification by exploiting transfer learning and feature concatenation. For both datasets, the Covid19 images were collected from patients with ages ranging from 40-84 from both genders. Also, they require a lot of computational resources (memory & storage) for building & training. Adv. Deep learning plays an important role in COVID-19 images diagnosis. PubMed The model was developed using Keras library47 with Tensorflow backend48. Such methods might play a significant role as a computer-aided tool for image-based clinical diagnosis soon. where \(R\in [0,1]\) is a random vector drawn from a uniform distribution and \(P=0.5\) is a constant number. & Carlsson, S. Cnn features off-the-shelf: an astounding baseline for recognition. Initialization phase: this phase devotes for providing a random set of solutions for both the prey and predator via the following formulas: where the Lower and Upper are the lower and upper boundaries in the search space, \(rand_1\) is a random vector \(\in\) the interval of (0,1). }\delta (1-\delta )(2-\delta ) U_{i}(t-2)\\&\quad + \frac{1}{4! Moreover, the Weibull distribution employed to modify the exploration function. 2022 May;144:105350. doi: 10.1016/j.compbiomed.2022.105350. Moreover, from Table4, it can be seen that the proposed FO-MPA provides better results in terms of F-Score, as it has the highest value in datatset1 and datatset2 which are 0.9821 and 0.99079, respectively. For the exploration stage, the weibull distribution has been applied rather than Brownian to bost the performance of the predator in stage 2 and the prey velocity in stage 1 based on the following formula: Where k, and \(\zeta\) are the scale and shape parameters. We have used RMSprop optimizer for weight updates, cross entropy loss function and selected learning rate as 0.0001. 11314, 113142S (International Society for Optics and Photonics, 2020). Experimental results have shown that the proposed Fuzzy Gabor-CNN algorithm attains highest accuracy, Precision, Recall and F1-score when compared to existing feature extraction and classification techniques. They showed that analyzing image features resulted in more information that improved medical imaging. Coronavirus Disease (COVID-19): A primer for emergency physicians (2020) Summer Chavez et al. Objective: To help improve radiologists' efficacy of disease diagnosis in reading computed tomography (CT) images, this study aims to investigate the feasibility of applying a modified deep learning (DL) method as a new strategy to automatically segment disease-infected regions and predict disease severity. Support Syst. Whereas, the worst algorithm was BPSO. For more analysis of feature selection algorithms based on the number of selected features (S.F) and consuming time, Fig. The announcement confirmed that from May 8, following Japan's Golden Week holiday period, COVID-19 will be officially downgraded to Class 5, putting the virus on the same classification level as seasonal influenza. Math. . Recently, a combination between the fractional calculus tool and the meta-heuristics opens new doors in providing robust and reliable variants41. 92, 103662. https://doi.org/10.1016/j.engappai.2020.103662 (2020). E. B., Traina-Jr, C. & Traina, A. J. The two datasets consist of X-ray COVID-19 images by international Cardiothoracic radiologist, researchers and others published on Kaggle. Biocybern. This dataset consists of 219 COVID-19 positive images and 1341 negative COVID-19 images. Comparison with other previous works using accuracy measure. Therefore in MPA, for the first third of the total iterations, i.e., \(\frac{1}{3}t_{max}\)). Al-qaness, M. A., Ewees, A. It is also noted that both datasets contain a small number of positive COVID-19 images, and up to our knowledge, there is no other sufficient available published dataset for COVID-19. It can be concluded that FS methods have proven their advantages in different medical imaging applications19. Initialize solutions for the prey and predator. (1): where \(O_k\) and \(E_k\) refer to the actual and the expected feature value, respectively. https://doi.org/10.1155/2018/3052852 (2018). In order to normalize the values between 0 and 1 by dividing by the sum of all feature importance values, as in Eq. They applied the SVM classifier for new MRI images to segment brain tumors, automatically. Automated detection of covid-19 cases using deep neural networks with x-ray images. In Proceedings of the IEEE Conference on Computer Vision and Pattern Recognition, 19 (2015). Comput. CAS where \(REfi_{i}\) represents the importance of feature i that were calculated from all trees, where \(normfi_{ij}\) is the normalized feature importance for feature i in tree j, also T is the total number of trees. After feature extraction, we applied FO-MPA to select the most significant features. Sci. Moreover, other COVID-19 positive images were added by the Italian Society of Medical and Interventional Radiology (SIRM) COVID-19 Database45. (14)-(15) are implemented in the first half of the agents that represent the exploitation. Future Gener. \delta U_{i}(t)+ \frac{1}{2! Background The large volume and suboptimal image quality of portable chest X-rays (CXRs) as a result of the COVID-19 pandemic could post significant challenges for radiologists and frontline physicians. Ozturk, T. et al. For the image features that led to categorization, there were varied levels of agreement in the interobserver and intraobserver components that . Feature selection based on gaussian mixture model clustering for the classification of pulmonary nodules based on computed tomography. A.A.E. 1. Table4 show classification accuracy of FO-MPA compared to other feature selection algorithms, where the best, mean, and STD for classification accuracy were calculated for each one, besides time consumption and the number of selected features (SF). Inceptions layer details and layer parameters of are given in Table1. FC provides a clear interpretation of the memory and hereditary features of the process. Chowdhury, M.E. etal. Hence, it was discovered that the VGG-16 based DTL model classified COVID-19 better than the VGG-19 based DTL model. Robustness-driven feature selection in classification of fibrotic interstitial lung disease patterns in computed tomography using 3d texture features. used a dark Covid-19 network for multiple classification experiments on Covid-19 with an accuracy of 87% [ 23 ]. If material is not included in the article's Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. Faramarzi et al.37 divided the agents for two halves and formulated Eqs. \(r_1\) and \(r_2\) are the random index of the prey. They employed partial differential equations for extracting texture features of medical images. By submitting a comment you agree to abide by our Terms and Community Guidelines. Med. In the meantime, to ensure continued support, we are displaying the site without styles & Cao, J. Syst. 7, most works are pre-prints for two main reasons; COVID-19 is the most recent and trend topic; also, there are no sufficient datasets that can be used for reliable results. Softw. In Proceedings of the IEEE Conference on Computer Vision and Pattern Recognition, 770778 (2016). The 1360 revised papers presented in these proceedings were carefully reviewed and selected from . Also, other recent published works39, who combined a CNN architecture with Weighted Symmetric Uncertainty (WSU) to select optimal features for traffic classification. 198 (Elsevier, Amsterdam, 1998). The combination of Conv. In my thesis project, I developed an image classification model to detect COVID-19 on chest X-ray medical data using deep learning models such . Feature selection using flower pollination optimization to diagnose lung cancer from ct images. Inf. Adv. Vis. A. The focus of this study is to evaluate and examine a set of deep learning transfer learning techniques applied to chest radiograph images for the classification of COVID-19, normal (healthy), and pneumonia. To evaluate the performance of the proposed model, we computed the average of both best values and the worst values (Max) as well as STD and computational time for selecting features. Stage 1: After the initialization, the exploration phase is implemented to discover the search space. Artif. Besides, the binary classification between two classes of COVID-19 and normal chest X-ray is proposed. You are using a browser version with limited support for CSS. Automatic CNN-based Chest X-Ray (CXR) image classification for detecting Covid-19 attracted so much attention. In this paper, we used TPUs for powerful computation, which is more appropriate for CNN. Comput. Harikumar et al.18 proposed an FS method based on wavelets to classify normality or abnormality of different types of medical images, such as CT, MRI, ultrasound, and mammographic images. In Dataset 2, FO-MPA also is reported as the highest classification accuracy with the best and mean measures followed by the BPSO. Aiming at the problems of poor attention to existing translation models, the insufficient ability of key transfer and generation, insufficient quality of generated images, and lack of detailed features, this paper conducts research on lung medical image translation and lung image classification based on . The shape of the output from the Inception is (5, 5, 2048), which represents a feature vector of size 51200. Whereas the worst one was SMA algorithm. The test accuracy obtained for the model was 98%. Civit-Masot et al. My education and internships have equipped me with strong technical skills in Python, deep learning models, machine learning classification, text classification, and more. Automated detection of alzheimers disease using brain mri imagesa study with various feature extraction techniques. This study aims to improve the COVID-19 X-ray image classification using feature selection technique by the regression mutual information deep convolution neuron networks (RMI Deep-CNNs). M.A.E. Afzali, A., Mofrad, F.B. The Weibull Distribution is a heavy-tied distribution which presented as in Fig. The results indicate that all CNN-based architectures outperform the ViT-based architecture in the binary classification of COVID-19 using CT images. Med. Table2 depicts the variation in morphology of the image, lighting, structure, black spaces, shape, and zoom level among the same dataset, as well as with the other dataset. Automatic COVID-19 lung images classification system based on convolution neural network. They used different images of lung nodules and breast to evaluate their FS methods. Litjens, G. et al. 121, 103792 (2020). While, MPA, BPSO, SCA, and SGA obtained almost the same accuracy, followed by both bGWO, WOA, and SMA. While the second half of the agents perform the following equations. A.T.S. <span> <h5>Background</h5> <p>The COVID19 pandemic has precipitated global apprehensions about increased fatalities and raised concerns about gaps in healthcare . COVID 19 X-ray image classification. In Smart Intelligent Computing and Applications, 305313 (Springer, 2019). 152, 113377 (2020). Key Definitions. The first one, dataset 1 was collected by Joseph Paul Cohen and Paul Morrison and Lan Dao42, where some COVID-19 images were collected by an Italian Cardiothoracic radiologist. Correspondence to 10, 10331039 (2020). Article I. S. of Medical Radiology. Two real datasets about COVID-19 patients are studied in this paper. Deep residual learning for image recognition. According to the best measure, the FO-MPA performed similarly to the HHO algorithm, followed by SMA, HGSO, and SCA, respectively. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. Stage 2: The prey/predator in this stage begin exploiting the best location that detects for their foods. Syst. The definitions of these measures are as follows: where TP (true positives) refers to the positive COVID-19 images that were correctly labeled by the classifier, while TN (true negatives) is the negative COVID-19 images that were correctly labeled by the classifier. Based on Standard Deviation measure (STD), the most stable algorithms were SCA, SGA, BPSO, and bGWO, respectively. Narayanan, S.J., Soundrapandiyan, R., Perumal, B. \(Fit_i\) denotes a fitness function value. The dataset consists of 21,165 chest X-ray (CXR) COVID-19 images distributed on four categories which are COVID19, lung opacity, viral pneumonia, and NORMAL (Non-COVID). Afzali et al.15 proposed an FS method based on principal component analysis and contour-based shape descriptors to detect Tuberculosis from lung X-Ray Images. The proposed IMF approach successfully achieves two important targets, selecting small feature numbers with high accuracy. EMRes-50 model . We can call this Task 2. Also, all other works do not give further statistics about their models complexity and the number of featurset produced, unlike, our approach which extracts the most informative features (130 and 86 features for dataset 1 and dataset 2) that imply faster computation time and, accordingly, lower resource consumption. Propose similarity regularization for improving C. Furthermore, deep learning using CNN is considered one of the best choices in medical imaging applications20, especially classification. MathSciNet They were manually aggregated from various web based repositories into a machine learning (ML) friendly format with accompanying data loader code. Li et al.36 proposed an FS method using a discrete artificial bee colony (ABC) to improve the classification of Parkinsons disease. Our proposed approach is called Inception Fractional-order Marine Predators Algorithm (IFM), where we combine Inception (I) with Fractional-order Marine Predators Algorithm (FO-MPA). Comput. Machine learning (ML) methods can play vital roles in identifying COVID-19 patients by visually analyzing their chest x-ray images. Accordingly, that reflects on efficient usage of memory, and less resource consumption. The proposed approach selected successfully 130 and 86 out of 51 K features extracted by inception from dataset 1 and dataset 2, while improving classification accuracy at the same time. Get the most important science stories of the day, free in your inbox. Objective: Lung image classification-assisted diagnosis has a large application market. They concluded that the hybrid method outperformed original fuzzy c-means, and it had less sensitive to noises. Credit: NIAID-RML contributed to preparing results and the final figures. While55 used different CNN structures. However, the proposed IMF approach achieved the best results among the compared algorithms in least time. Also, in12, an Fs method based on SVM was proposed to detect Alzheimers disease from SPECT images. Chollet, F. Keras, a python deep learning library. Stage 3: This stage executed on the last third of the iteration numbers (\(t>\frac{2}{3}t_{max}\)) where based on the following formula: Eddy formation and Fish Aggregating Devices effect: Faramarzi et al.37 considered the external impacts from the environment, such as the eddy formation or Fish Aggregating Devices (FADs) effects to avoid the local optimum solutions. & Dai, Q. Discriminative clustering and feature selection for brain mri segmentation. In the last two decades, two famous types of coronaviruses SARS-CoV and MERS-CoV had been reported in 2003 and 2012, in China, and Saudi Arabia, respectively3. There are three main parameters for pooling, Filter size, Stride, and Max pool. the best experience, we recommend you use a more up to date browser (or turn off compatibility mode in Shi, H., Li, H., Zhang, D., Cheng, C. & Cao, X. \end{aligned}$$, $$\begin{aligned} U_i(t+1)-U_i(t)=P.R\bigotimes S_i \end{aligned}$$, $$\begin{aligned} D ^{\delta } \left[ U_{i}(t+1)\right] =P.R\bigotimes S_i \end{aligned}$$, $$D^{\delta } \left[ {U_{i} (t + 1)} \right] = U_{i} (t + 1) + \sum\limits_{{k = 1}}^{m} {\frac{{( - 1)^{k} \Gamma (\delta + 1)U_{i} (t + 1 - k)}}{{\Gamma (k + 1)\Gamma (\delta - k + 1)}}} = P \cdot R \otimes S_{i} .$$, $$\begin{aligned} \begin{aligned} U(t+1)_{i}= - \sum _{k=1}^{m} \frac{(-1)^k\Gamma (\delta +1)U_{i}(t+1-k)}{\Gamma (k+1)\Gamma (\delta -k+1)} + P.R\bigotimes S_i. Faramarzi et al.37 implement this feature via saving the previous best solutions of a prior iteration, and compared with the current ones; the solutions are modified based on the best one during the comparison stage. They shared some parameters, such as the total number of iterations and the number of agents which were set to 20 and 15, respectively. Can ai help in screening viral and covid-19 pneumonia? Inspired by this concept, Faramarzi et al.37 developed the MPA algorithm by considering both of a predator a prey as solutions. 4 and Table4 list these results for all algorithms. Article To further analyze the proposed algorithm, we evaluate the selected features by FO-MPA by performing classification. Although convolutional neural networks (CNNs) is considered the current state-of-the-art image classification technique, it needs massive computational cost for deployment and training. We are hiring! As seen in Fig. So, transfer learning is applied by transferring weights that were already learned and reserved into the structure of the pre-trained model, such as Inception, in this paper. Anyone you share the following link with will be able to read this content: Sorry, a shareable link is not currently available for this article. Therefore, in this paper, we propose a hybrid classification approach of COVID-19. Also, in58 a new CNN architecture called EfficientNet was proposed, where more blocks were added on top of the model after applying normalization of images pixels intensity to the range (0 to 1). & Pouladian, M. Feature selection for contour-based tuberculosis detection from chest x-ray images. Also, because COVID-19 is a virus, distinguish COVID-19 from common viral . In9, to classify ultrasound medical images, the authors used distance-based FS methods and a Fuzzy Support Vector Machine (FSVM). This combination should achieve two main targets; high performance and resource consumption, storage capacity which consequently minimize processing time. Stage 2 has been executed in the second third of the total number of iterations when \(\frac{1}{3}t_{max}< t< \frac{2}{3}t_{max}\). and JavaScript. However, the modern name is tenggiling.In Javanese it is terenggiling; and in the Philippine languages, it is goling, tanggiling, or balintong (with the same meaning).. Our dataset consisting of 60 chest CT images of COVID-19 and non-COVID-19 patients was pre-processed and segmented using a hybrid watershed and fuzzy c-means algorithm. How- individual class performance. The proposed approach was evaluated on two public COVID-19 X-ray datasets which achieves both high performance and reduction of computational complexity. Nguyen, L.D., Lin, D., Lin, Z. In COVID19 triage, DB-YNet is a promising tool to assist physicians in the early identification of COVID19 infected patients for quick clinical interventions. PVT-COV19D: COVID-19 Detection Through Medical Image Classification Based on Pyramid Vision Transformer. So, based on this motivation, we apply MPA as a feature selector from deep features that produced from CNN (largely redundant), which, accordingly minimize capacity and resources consumption and can improve the classification of COVID-19 X-ray images. They compared the BA to PSO, and the comparison outcomes showed that BA had better performance. Toaar, M., Ergen, B. COVID-19 image classification using deep features and fractional-order marine predators algorithm Authors. Remainder sections are organized as follows: Material and methods sectionpresents the methodology and the techniques used in this work including model structure and description. In this subsection, the performance of the proposed COVID-19 classification approach is compared to other CNN architectures. Mirjalili, S., Mirjalili, S. M. & Lewis, A. Grey wolf optimizer. If the random solution is less than 0.2, it converted to 0 while the random solution becomes 1 when the solutions are greater than 0.2. (33)), showed that FO-MPA also achieved the best value of the fitness function compared to others. Li, H. etal. Article However, using medical imaging, chest CT, and chest X-ray scan can play a critical role in COVID-19 diagnosis. The predator tries to catch the prey while the prey exploits the locations of its food. The results showed that the proposed approach showed better performances in both classification accuracy and the number of extracted features that positively affect resource consumption and storage efficiency. The symbol \(r\in [0,1]\) represents a random number. For diagnosing COVID-19, the RT-PCR (real-time polymerase chain reaction) is a standard diagnostic test, but, it can be considered as a time-consuming test, more so, it also suffers from false negative diagnosing4. Eng. Test the proposed Inception Fractional-order Marine Predators Algorithm (IFM) approach on two publicity available datasets contain a number of positive negative chest X-ray scan images of COVID-19. Mutation: A mutation refers to a single change in a virus's genome (genetic code).Mutations happen frequently, but only sometimes change the characteristics of the virus. Decis. It also contributes to minimizing resource consumption which consequently, reduces the processing time. IRBM https://doi.org/10.1016/j.irbm.2019.10.006 (2019). As a result, the obtained outcomes outperformed previous works in terms of the models general performance measure. Keywords - Journal. \end{aligned} \end{aligned}$$, $$\begin{aligned} \begin{aligned} U_{i}(t+1)&= \frac{1}{1!} Future Gener. This dataset currently contains hundreds of frontal view X-rays and is the largest public resource for COVID-19 image and prognostic data, making it a necessary resource to develop and evaluate tools to aid in the treatment of CO VID-19. (iii) To implement machine learning classifiers for classification of COVID and non-COVID image classes. The COVID-19 pandemic has been having a severe and catastrophic effect on humankind and is being considered the most crucial health calamity of the century. 42, 6088 (2017). Evaluation outcomes showed that GA based FS methods outperformed traditional approaches, such as filter based FS and traditional wrapper methods. Use of chest ct in combination with negative rt-pcr assay for the 2019 novel coronavirus but high clinical suspicion. org (2015). Efficient classification of white blood cell leukemia with improved swarm optimization of deep features. (4). Arijit Dey, Soham Chattopadhyay, Ram Sarkar, Dandi Yang, Cristhian Martinez, Jesus Carretero, Jess Alejandro Alzate-Grisales, Alejandro Mora-Rubio, Reinel Tabares-Soto, Lo Dumortier, Florent Gupin, Thomas Grenier, Linda Wang, Zhong Qiu Lin & Alexander Wong, Afnan Al-ali, Omar Elharrouss, Somaya Al-Maaddeed, Robbie Sadre, Baskaran Sundaram, Daniela Ushizima, Zahid Ullah, Muhammad Usman, Jeonghwan Gwak, Scientific Reports Detection of lung cancer on chest ct images using minimum redundancy maximum relevance feature selection method with convolutional neural networks. Chong, D. Y. et al. Chollet, F. Xception: Deep learning with depthwise separable convolutions. 22, 573577 (2014). The conference was held virtually due to the COVID-19 pandemic.